BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E01LP1|AL425865
(810 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1437 1603 0.0
>3x_Contig1437
Length = 8480
Score = 1603 bits (808), Expect = 0.0
Identities = 809/810 (99%)
Strand = Plus / Minus
Query: 1 gatcctatccaattctgggtctgctttttttttttctttctttactattcagcggggcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3425 gatcctatccaattctgggtctgctttttttttttctttctttactattcagcggggcgt 3366
Query: 61 attttccatcgaaactgtcaatccatcgtagcatcgtagttttatgccaaagcatgtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3365 attttccatcgaaactgtcaatccatcgtagcatcgtagttttatgccaaagcatgtatt 3306
Query: 121 atatataaatactttggtgtaagttcgtataatttggtacaatctttcaccactgcgagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3305 atatataaatactttggtgtaagttcgtataatttggtacaatctttcaccactgcgagt 3246
Query: 181 agtaaattatcttttcatttattgcattattgtagggaggttagaactcctaggaaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3245 agtaaattatcttttcatttattgcattattgtagggaggttagaactcctaggaaattg 3186
Query: 241 ttttaagaaacgttcaagcacaaagccatgacttcagtgtggcatgagacttacgatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3185 ttttaagaaacgttcaagcacaaagccatgacttcagtgtggcatgagacttacgatggt 3126
Query: 301 tcaacaattgcgtttatcttcatgggatgcgctttagtattcattatggtacccggtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3125 tcaacaattgcgtttatcttcatgggatgcgctttagtattcattatggtacccggtttg 3066
Query: 361 ggtttcttatattcaggtttagcaagaaggaaatctgctctttcgttgatttgggcagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3065 ggtttcttatattcaggtttagcaagaaggaaatctgctctttcgttgatttgggcagtt 3006
Query: 421 atcatggctactttggttggaatggtccaatggtatttctggggttactctttggccttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3005 atcatggctactttggttggaatggtccaatggtatttctggggttactctttggccttt 2946
Query: 481 tcaaagactgcgatcaatcacaaattcataggggatttgaactcgttcgggttcagaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2945 tcaaagactgcgatcaatcacaaattcataggggatttgaactcgttcgggttcagaaac 2886
Query: 541 gtttatgggtatgcggatcccgaggatccaacgacgtacccggaattagcatgggcagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2885 gtttatgggtatgcggatcccgaggatccaacgacgtacccggaattagcatgggcagct 2826
Query: 601 ttccaaggtatgtttttatgtgtcactttgagtattattgccggtgccactgcagaaaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2825 ttccaaggtatgtttttatgtgtcactttgagtattattgccggtgccactgcagaaaga 2766
Query: 661 ggtagactcttgcctcatatggttttcctattctgtttcgcaaccattgtgtactgtccc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2765 ggtagactcttgcctcatatggttttcctattctgtttcgcaaccattgtgtactgtccc 2706
Query: 721 gttacattttgggtttggtgccctgatggatgggctgccagatggggagtkctagactgg 780
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2705 gttacattttgggtttggtgccctgatggatgggctgccagatggggagtgctagactgg 2646
Query: 781 gccggtggtggtcctgttgagattttgagt 810
||||||||||||||||||||||||||||||
Sbjct: 2645 gccggtggtggtcctgttgagattttgagt 2616
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,371
Number of Sequences: 1807
Number of extensions: 11371
Number of successful extensions: 157
Number of sequences better than 1.0e-20: 1
length of query: 810
length of database: 10,358,551
effective HSP length: 16
effective length of query: 794
effective length of database: 10,329,639
effective search space: 8201733366
effective search space used: 8201733366
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)